Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887902.1_cds_XP_016442390.1_37662
CDS Infomation

[gene=LOC107767809] [db_xref=GeneID:107767809] [protein=microtubule-associated protein TORTIFOLIA1-like] [protein_id=XP_016442390.1] [location=complement(join(50106..50122,50824..50989,51486..52187,53302..53960,54333..54435,54542..54736,55042..55719))] [gbkey=CDS]
Sequence

ATGAGCAGGCAAATAGAGATGAAGACACATGTGAATATGGTGAAAGGAAGAGGTCCCAGC
AGGGTGAACAGCCAACAGGTTGTTTTCGAGCTTAAACAACGTGTGGTTCTTGCGCTGAAC
AAGCTTGCAGATAGGGATACTTACCGACTTGGAGTTGAAGAGCTAGAGAAAATAATTGAA
TGCTTAACCCCAGATGGAGTTGCTCCATTTCTATCCTGTATATTAGATACTGATTCGGAG
CAGAAAAGTGCTGTTCGTAAGGAATCTATCCGGTTGATGGGCATGCTAGCCAATTTCCAT
GATAGCACTGTTGTTCCACATCTTGGGAAGATGGTATCCAGCATTGTAAAGCGTCTCAAG
GATTCGGATACTGTTGTAAGAGATGCTTGTGTAGATACTGTTGGAATTTTGGCTTCTAAA
ATGAGCAGTGTTGCAGGTGACGATGACAATGATGGAGTTTTTGTGGTGCTAGTGAGACCT
ATTTTTGAATCCTTAGGAGAACAAAATAAGCAGGTGCAAACTGGTTCAGCGCTGTGTTTG
GCTCGGGTCATAGACAGTATTCAGAACCCCCCAGCTGCCATTTTGCAGAAGATGCTGGCT
AAAACTGTGAAGTTGCTTAAGAATCCACACTTCATGGCAAAGCCAGCTGTTATTGAATTG
AATAGAAGCATTATTCAGGCTGGTGGTGCCAATACACATAGTGCTTTATCAATTGCAATG
GCTAGCATTCAAGAAGTACTCAAGAACAGTGATTGGGCAACAAGAAAAGCTGCATGTGCC
GCATTAGGGGACATTGCTTCAACTGGTGGAGCATTGTTCAGTGCTTTCAAGTCCTCCAGC
ATCCGTAGCCTCGAATCCTGTCGATTTGATAAGGTGAAGCCAGTCAGGGACTCCGCATTG
CAAGCTTTACATCTGTGGAAAAGGCTTCCCGGCCCTGGTACATCTGAACCTTCTGAAGCA
GGCTCTTCGATAAAAGAAAATCGGTATAAAGATGATTATGGTGATATAACAAGTGCCAGT
GAGACAACACTGAAGGATGCCACACCTAAGAAATTTGGTTGTGACTCGACTAGAAACAAG
CTTCCCCTTTCTTTGAGAAAAGCAGGCCATAACCATGTCGAAAAGCCTCAGCACTGCGGA
ACTAATGAGTGGCATGTGGAGGTAGCAGTTCCGACAACCCGTAAGATCTTTATGCCAGAA
GTTAGGGATGAAGAATCAGAGGGTAGTTCTGTTATGAAGGCAGTTGAAAAAAGTGCTGAG
ACTAGAAGTTCTCATGATATTGAATATGAATATGTGCACATAGATGACAAACAGGAGTGC
TCTTCTGGGTCAAATCTGTTTCCTGATAACTTTCAACGCAAAGAAGTCATGGGTTCTCAC
CAGATAATTGATGAGGCCAGTTTGGGTACACTATTGGGAACAAGTCAGCGTTCTGTAGTT
GAAGAAATCAGTATTGAGGAACAACGATATTTTGGTGGAACACAGGACCGAAGAAGCTTA
GATTCAACAACTACTGAATTGAGTTCTCAAAAATTGCATGGCTGTTGTTCTCATATAGCA
AAAGAAATGTTATCTGTCCGAAAGCAACTCTTGGATATTGAGAATAAGCAATCCAATTTA
CTGGATTTACTAAAGGAGTTCACAACCAACATAGTGGATAACCTGTCAATGATGCAAATG
AAGGTGGCCGGTCTTGAAGGCATGGTTGATAGAATGGCCAGTGAACTTTCTTATGGAGGG
AGATGTCCTGATCCATTGACAACAAAATTTATGAAAAGAAGTCCTTCTGTTGCTTCTCCA
AGACTCTCCACATACACCCCAAGGCCATCTGTCGATATACCTCATAGGAAGTCTCCGCTA
CTGCCCACCAAAGGCATGGATGTTCAAGAGGAAAGGACACTTGTGAAGAGTAGATCGAGC
AGTTTTAGAACACAAAATCTAGACATGTGGACTGATCCTGCTGCAAAACAAGGTGGATAT
CCTGTTGGAAAGGGAGTTCACAAAAATAGTGGACAGGGAACTCATGGAGGTCAATTGAGG
AGAAACAATGATGTCTTCAGCAGTATTTCTATAACTAATGCTAAACAACACCACGTAGAT
GTCAAGAACAACCTCTGGAGAGTTGTTAAAGAACATCTGTTGGAAGGGGATGTAGACTCT
GCTTATGTGGAAGCCCTTTATTCTGGTGATGAACTTGTTTTGTTTGAACTTATTGATACA
ACAGGTCCGGTTCTGGAGAATTTATCGCAGAAGACCGCAAGTGATCTTTTGGCCACTTTG
GCATCGTACTTCTGTGAACAAACATATGTGAATAACATAATTCCCTGGCTGCAAAAGGTG
GTGGACTTGAGTTCCGTCCATGGACCAGATTGCATTGCCCTTTCTTCAAAAGCAAGGCGG
GAATTTCTTTCTGCATTTCAGGATGCAATAAAGGGTGGATATTCTACCCCGGCAGAGAGA
AAATCTTTGATGCAATTGGCAATGACTTTAAACCAGATTTGGGGAAAAAATGCGCCATAA

Peptide Sequence

PEP ID

XP_016442390.1
PEP Infomation

PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Nicotiana tabacum]
Sequence

MSRQIEMKTHVNMVKGRGPSRVNSQQVVFELKQRVVLALNKLADRDTYRLGVEELEKIIE
CLTPDGVAPFLSCILDTDSEQKSAVRKESIRLMGMLANFHDSTVVPHLGKMVSSIVKRLK
DSDTVVRDACVDTVGILASKMSSVAGDDDNDGVFVVLVRPIFESLGEQNKQVQTGSALCL
ARVIDSIQNPPAAILQKMLAKTVKLLKNPHFMAKPAVIELNRSIIQAGGANTHSALSIAM
ASIQEVLKNSDWATRKAACAALGDIASTGGALFSAFKSSSIRSLESCRFDKVKPVRDSAL
QALHLWKRLPGPGTSEPSEAGSSIKENRYKDDYGDITSASETTLKDATPKKFGCDSTRNK
LPLSLRKAGHNHVEKPQHCGTNEWHVEVAVPTTRKIFMPEVRDEESEGSSVMKAVEKSAE
TRSSHDIEYEYVHIDDKQECSSGSNLFPDNFQRKEVMGSHQIIDEASLGTLLGTSQRSVV
EEISIEEQRYFGGTQDRRSLDSTTTELSSQKLHGCCSHIAKEMLSVRKQLLDIENKQSNL
LDLLKEFTTNIVDNLSMMQMKVAGLEGMVDRMASELSYGGRCPDPLTTKFMKRSPSVASP
RLSTYTPRPSVDIPHRKSPLLPTKGMDVQEERTLVKSRSSSFRTQNLDMWTDPAAKQGGY
PVGKGVHKNSGQGTHGGQLRRNNDVFSSISITNAKQHHVDVKNNLWRVVKEHLLEGDVDS
AYVEALYSGDELVLFELIDTTGPVLENLSQKTASDLLATLASYFCEQTYVNNIIPWLQKV
VDLSSVHGPDCIALSSKARREFLSAFQDAIKGGYSTPAERKSLMQLAMTLNQIWGKNAP

Transcript Sequence

Gene sequence data has not been registered.